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Please use this identifier to cite or link to this item: http://hdl.handle.net/2440/68855

Type: Journal article
Title: Multiple geographic origins of commensalism and complex dispersal history of black rats
Author: Aplin, K.
Suzuki, H.
Chinen, A.
Chesser, R.
ten Have, J.
Donnellan, S.
Austin, J.
Frost, A.
Gonzales, J.
Herbreteau, V.
Catzeflis, F.
Soubrier, J.
Fang, Y.P.
Robins, J.
Matisoo-Smith, E.
Bastos, A.
Maryanto, I.
Sinaga, M.
Denys, C.
Van Den Bussche, R.
et al.
Citation: PLoS One, 2011; 6(11):1-20
Publisher: Public Library of Science
Issue Date: 2011
ISSN: 1932-6203
Statement of
Responsibility: 
Ken P. Aplin...Stephen C. Donnellan, Jeremy Austin...Julien Soubrier...Alan Cooper
Abstract: The Black Rat (Rattus rattus) spread out of Asia to become one of the world's worst agricultural and urban pests, and a reservoir or vector of numerous zoonotic diseases, including the devastating plague. Despite the global scale and inestimable cost of their impacts on both human livelihoods and natural ecosystems, little is known of the global genetic diversity of Black Rats, the timing and directions of their historical dispersals, and the risks associated with contemporary movements. We surveyed mitochondrial DNA of Black Rats collected across their global range as a first step towards obtaining an historical genetic perspective on this socioeconomically important group of rodents. We found a strong phylogeographic pattern with well-differentiated lineages of Black Rats native to South Asia, the Himalayan region, southern Indochina, and northern Indochina to East Asia, and a diversification that probably commenced in the early Middle Pleistocene. We also identified two other currently recognised species of Rattus as potential derivatives of a paraphyletic R. rattus. Three of the four phylogenetic lineage units within R. rattus show clear genetic signatures of major population expansion in prehistoric times, and the distribution of particular haplogroups mirrors archaeologically and historically documented patterns of human dispersal and trade. Commensalism clearly arose multiple times in R. rattus and in widely separated geographic regions, and this may account for apparent regionalism in their associated pathogens. Our findings represent an important step towards deeper understanding the complex and influential relationship that has developed between Black Rats and humans, and invite a thorough re-examination of host-pathogen associations among Black Rats.
Rights: Copyright: © 2011 Aplin et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
RMID: 0020114914
DOI: 10.1371/journal.pone.0026357
Appears in Collections:Australian Centre for Ancient DNA publications
Environment Institute Leaders publications
Environment Institute publications
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