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Type: Journal article
Title: Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain SRDI565
Author: Reeve, W.
Drew, E.
Ballard, R.
Melino, V.
Tian, R.
De Meyer, S.
Brau, L.
Ninawi, M.
Teshima, H.
Goodwin, L.
Chain, P.
Liolios, K.
Pati, A.
Mavromatis, K.
Ivanova, N.
Markowitz, V.
Woyke, T.
Kyrpides, N.
Citation: Standards in Genomic Sciences, 2013; 9(2):220-231
Publisher: Genomic Standards Consortium
Issue Date: 2013
ISSN: 1944-3277
Statement of
Wayne Reeve, Elizabeth Drew, Ross Ballard, Vanessa Melino, Rui Tian, Sofie De Meyer, Lambert Brau, Mohamed Ninawi, Hazuki Teshima, Lynne Goodwin, Patrick Chain, Konstantinos Liolios, Amrita Pati, Konstantinos Mavromatis, Natalia Ivanova, Victor Markowitz, Tanja Woyke, Nikos Kyrpides.
Abstract: Rhizobium leguminosarum bv. trifolii SRDI565 (syn. N8-J) is an aerobic, motile, Gram-negative, non-spore-forming rod. SRDI565 was isolated from a nodule recovered from the roots of the annual clover Trifolium subterraneum subsp. subterraneum grown in the greenhouse and inoculated with soil collected from New South Wales, Australia. SRDI565 has a broad host range for nodulation within the clover genus, however N2-fixation is sub-optimal with some Trifolium species and ineffective with others. Here we describe the features of R. leguminosarum bv. trifolii strain SRDI565, together with genome sequence information and annotation. The 6,905,599 bp high-quality-draft genome is arranged into 7 scaffolds of 7 contigs, contains 6,750 protein-coding genes and 86 RNA-only encoding genes, and is one of 100 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project.
Keywords: Alphaproteobacteria
nitrogen fixation
root-nodule bacteria
Rights: This work is licensed under a Creative Commons Attribution 3.0 License [].
DOI: 10.4056/sigs.4468250
Appears in Collections:Agriculture, Food and Wine publications
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