Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain SRDI943

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dc.contributor.authorReeve, W.
dc.contributor.authorDrew, E.
dc.contributor.authorBallard, R.
dc.contributor.authorMelino, V.
dc.contributor.authorTian, R.
dc.contributor.authorDe Meyer, S.
dc.contributor.authorBrau, L.
dc.contributor.authorNinawi, M.
dc.contributor.authorDaligault, H.
dc.contributor.authorDavenport, K.
dc.contributor.authorErkkila, T.
dc.contributor.authorGoodwin, L.
dc.contributor.authorGu, W.
dc.contributor.authorMunk, C.
dc.contributor.authorTeshima, H.
dc.contributor.authorXu, Y.
dc.contributor.authorChain, P.
dc.contributor.authorKyrpides, N.
dc.date.issued2013
dc.description.abstractRhizobium leguminosarum bv. trifolii SRDI943 (strain syn. V2-2) is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a root nodule of Trifolium michelianum Savi cv. Paradana that had been grown in soil collected from a mixed pasture in Victoria, Australia. This isolate was found to have a broad clover host range but was sub-optimal for nitrogen fixation with T. subterraneum (fixing 20-54% of reference inoculant strain WSM1325) and was found to be totally ineffective with the clover species T. polymorphum and T. pratense. Here we describe the features of R. leguminosarum bv. trifolii strain SRDI943, together with genome sequence information and annotation. The 7,412,387 bp high-quality-draft genome is arranged into 5 scaffolds of 5 contigs, contains 7,317 protein-coding genes and 89 RNA-only encoding genes, and is one of 100 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project.
dc.description.statementofresponsibilityWayne Gerald Reeve, Elizabeth Drew, Ross Ballard, Vanessa Melino, Rui Tian, Sofie De Meyer, Lambert Brau, Mohamed Ninawi, Hajnalka Daligault, Karen Davenport, Tracy Erkkila, Lynne Goodwin, Wei Gu, Christine Munk, Hazuki Teshima, Yan Xu, Patrick Chain, Nikos Kyrpides
dc.identifier.citationStandards in Genomic Sciences, 2013; 9(2):232-242
dc.identifier.doi10.4056/sigs.4478252
dc.identifier.issn1944-3277
dc.identifier.issn1944-3277
dc.identifier.orcidMelino, V. [0000-0003-2742-5079]
dc.identifier.urihttp://hdl.handle.net/2440/88914
dc.language.isoen
dc.publisherGenomic Standards Consortium
dc.rightsThis work is licensed under a Creative Commons Attribution 3.0 License [http://creativecommons.org/licenses/by/3.0/].
dc.source.urihttps://doi.org/10.4056/sigs.4478252
dc.subjectAlphaproteobacteria
dc.subjectnitrogen fixation
dc.subjectrhizobia
dc.subjectroot-nodule bacteria
dc.titleGenome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain SRDI943
dc.typeJournal article
pubs.publication-statusPublished

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